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Intron Name: Anas_platyrhynchos_platyrhynchos_2_14801625_14801745_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14801625 - 14801745

Intron Length:

121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTTAATAATA

Flanking Amino Acid:

KCSNISIGDEVRFEINVTAY

Intron Amino Acid Position:

644

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

1.1

78.4

32.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

92.6

0.96

0.7

88.3

28.9

Minor 5ss

-0.4

2.6

61.1

43.8

Minor BPS

52.5

0.08

1.9

68.86

37.7

Associated Gene:

Gene:

ITGB1

Ensembl Gene ID:

ENSAPLG00000009293

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046467

14772375 - 14816129

43755

ENSAPLT00000017287

14772375 - 14816129

43755

ENSAPLT00000009794

14772375 - 14809935

37561