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Intron Name: Anas_platyrhynchos_platyrhynchos_2_148042802_148062454_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
148042802 - 148062454

Intron Length:
19653

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATTGGAG

5'SS Class:
major

3'SS Sequence:
CTCTTTGTTTTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TATTAAT

U12 Branch Point Sequence:
ATGGGCCTAATG

Flanking Amino Acid:
LRLETENQRQERLVLSVLPR

Intron Amino Acid Position:
352

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.1
0.48
1.1
58.5
40.4

Major BPS
91.8
1.04
0.7
90.2
19.3

Major PPT
81.2
0.7
0.8
80.2
31.9

Minor 5ss
34.7
-1.7
3.5
46
49.3

Minor BPS
44.1
-0.5
2.1
49.88
44.6

Associated Gene:

Gene:
ADCY8

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

147971518 - 148088075
116558

147971518 - 148088075
116558

147971518 - 148088075
116558