Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_148118167_148119328_F

Intron Information:

Intron Rank:

150795

Intron Class:

major

Intron Phase:

Intron Coordinates:

148118167 - 148119328

Intron Length:

1162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCCCA

5'SS Class:

major

3'SS Sequence:

CACCTTTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTGTTTTTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

60.3

40.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

73.7

0.53

0.8

67.7

Minor 5ss

32.9

-2

36.8

41.4

Minor BPS

63.2

0.41

1.4

67.43

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024761

148118158 - 148120842

2685