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Intron Name: Anas_platyrhynchos_platyrhynchos_2_148311297_148350038_R

Intron Information:

Intron Rank:

132291

Intron Class:

major

Intron Phase:

Intron Coordinates:

148311297 - 148350038

Intron Length:

38742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAGGTATT

5'SS Class:

major

3'SS Sequence:

TGTTTGTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

ATTTTTGTATGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

75.5

40.6

Major BPS

0.3

62.3

30.4

Major PPT

82.9

0.74

0.8

81.2

36.5

Minor 5ss

41.5

-0.9

3.2

42.5

Minor BPS

44.6

-0.3

2.3

68.89

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041067

148310211 - 148350086

39876