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Intron Name: Anas_platyrhynchos_platyrhynchos_2_148415445_148420595_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

148415445 - 148420595

Intron Length:

5151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTATTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

GTTTTATTAAAA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

86.4

28.9

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

86.2

0.81

0.8

80.7

35.9

Minor 5ss

43.5

-0.7

2.9

62.1

37.1

Minor BPS

63.1

0.41

1.7

74.65

Associated Gene:

Gene:

EFR3A

Ensembl Gene ID:

ENSAPLG00000004684

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041403

148415395 - 148491642

76248

ENSAPLT00000034880

148412520 - 148492836

80317