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Intron Name: Anas_platyrhynchos_platyrhynchos_2_148420686_148433890_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148420686 - 148433890

Intron Length:

13205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

AATCTCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TTGTTCTAAATT

Flanking Amino Acid:

MGRKGVCCCCAALR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

75.5

40.6

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

77.3

0.61

0.9

70.5

35.2

Minor 5ss

34.8

-1.7

41.4

44.7

Minor BPS

68.1

0.65

1.6

82.85

39.2

Associated Gene:

Gene:

EFR3A

Ensembl Gene ID:

ENSAPLG00000004684

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041403

148415395 - 148491642

76248

ENSAPLT00000034880

148412520 - 148492836

80317