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Intron Name: Anas_platyrhynchos_platyrhynchos_2_148445342_148449092_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148445342 - 148449092

Intron Length:

3751

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

TTTGCTTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TATTTCATAACT

Flanking Amino Acid:

SCDHDPEIQKEIRIAGIRGI

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

69.1

37.3

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

78.6

0.64

0.8

77.7

31.1

Minor 5ss

35.2

-1.7

3.2

41.6

38.8

Minor BPS

74.4

0.84

1.5

90.12

33.1

Associated Gene:

Gene:

EFR3A

Ensembl Gene ID:

ENSAPLG00000004684

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034880

148412520 - 148492836

80317

ENSAPLT00000023261

148412520 - 148491642

79123

ENSAPLT00000004890

148430161 - 148492836

62676

ENSAPLT00000041403

148415395 - 148491642

76248