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Intron Name: Anas_platyrhynchos_platyrhynchos_2_148456127_148461393_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148456127 - 148461393

Intron Length:

5267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTAAGTTGG

5'SS Class:

major

3'SS Sequence:

TTTTTTCCCATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

ATTATTTCAAAT

Flanking Amino Acid:

IMNNAVRPVFAHLDHHKLWD

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.42

1.4

60.6

46.7

Major BPS

84.7

0.86

74.3

40.7

Major PPT

84.6

0.78

0.6

81.2

24.1

Minor 5ss

40.5

-1.1

2.8

44.8

43.4

Minor BPS

52.9

0.17

1.6

72.43

38.2

Associated Gene:

Gene:

EFR3A

Ensembl Gene ID:

ENSAPLG00000004684

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023261

148412520 - 148491642

79123

ENSAPLT00000004890

148430161 - 148492836

62676

ENSAPLT00000041403

148415395 - 148491642

76248

ENSAPLT00000034880

148412520 - 148492836

80317