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Intron Name: Anas_platyrhynchos_platyrhynchos_2_148462520_148464153_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148462520 - 148464153

Intron Length:

1634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

GTGTTGTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTGAT

U12 Branch Point Sequence:

TTTCCCTTGATG

Flanking Amino Acid:

AVAIAAKGSIGPAVLEVFNT

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.2

1.11

0.7

90.9

28.7

Major BPS

71.5

0.53

1.1

43.2

Major PPT

78.3

0.64

69.2

46.1

Minor 5ss

40.2

-1.1

3.1

58.6

45.9

Minor BPS

74.7

0.63

1.3

76.25

35.2

Associated Gene:

Gene:

EFR3A

Ensembl Gene ID:

ENSAPLG00000004684

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034880

148412520 - 148492836

80317

ENSAPLT00000023261

148412520 - 148491642

79123

ENSAPLT00000004890

148430161 - 148492836

62676

ENSAPLT00000041403

148415395 - 148491642

76248