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Intron Name: Anas_platyrhynchos_platyrhynchos_2_148464319_148465614_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148464319 - 148465614

Intron Length:

1296

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTAAAT

U12 Branch Point Sequence:

TTTTCTTTTTTT

Flanking Amino Acid:

IVQNAIIQTIGFFGSNLPDY

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

84.9

26.3

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

32.1

-2

2.8

39.2

40.5

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

EFR3A

Ensembl Gene ID:

ENSAPLG00000004684

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023261

148412520 - 148491642

79123

ENSAPLT00000004890

148430161 - 148492836

62676

ENSAPLT00000041403

148415395 - 148491642

76248

ENSAPLT00000034880

148412520 - 148492836

80317