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Intron Name: Anas_platyrhynchos_platyrhynchos_2_148467693_148470577_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148467693 - 148470577

Intron Length:

2885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

CAATTATGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TCAGCTTCAATT

Flanking Amino Acid:

QIMLLRSLLMVTSGYKATTI

Intron Amino Acid Position:

468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

74.5

41.9

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

60.1

0.23

1.1

43.4

Minor 5ss

43.9

-0.7

3.2

62.5

43.1

Minor BPS

54.5

0.22

1.6

68.4

43.2

Associated Gene:

Gene:

EFR3A

Ensembl Gene ID:

ENSAPLG00000004684

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041403

148415395 - 148491642

76248

ENSAPLT00000034880

148412520 - 148492836

80317

ENSAPLT00000023261

148412520 - 148491642

79123

ENSAPLT00000004890

148430161 - 148492836

62676