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Intron Name: Anas_platyrhynchos_platyrhynchos_2_148471305_148475581_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148471305 - 148475581

Intron Length:

4277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTTCATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTTTTCACT

Flanking Amino Acid:

SRQDVSFMKKHGQQLYRHIY

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.2

30.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.68

0.8

76.3

32.4

Minor 5ss

29.8

-2.3

3.3

38.4

46.6

Minor BPS

61.3

0.44

1.8

82.56

39.6

Associated Gene:

Gene:

EFR3A

Ensembl Gene ID:

ENSAPLG00000004684

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041403

148415395 - 148491642

76248

ENSAPLT00000034880

148412520 - 148492836

80317

ENSAPLT00000023261

148412520 - 148491642

79123

ENSAPLT00000004890

148430161 - 148492836

62676