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Intron Name: Anas_platyrhynchos_platyrhynchos_2_148475744_148476884_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148475744 - 148476884

Intron Length:

1141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGTC

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

GAGGATGTAACA

Flanking Amino Acid:

DLIRLAIALQDIAIINEDNL

Intron Amino Acid Position:

605

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

75.1

33.2

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

0.65

0.9

75.9

Minor 5ss

41.1

-1

3.4

58.5

46.3

Minor BPS

42.6

-0.5

2.1

49.74

41.3

Associated Gene:

Gene:

EFR3A

Ensembl Gene ID:

ENSAPLG00000004684

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034880

148412520 - 148492836

80317

ENSAPLT00000023261

148412520 - 148491642

79123

ENSAPLT00000004890

148430161 - 148492836

62676

ENSAPLT00000041403

148415395 - 148491642

76248