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Intron Name: Anas_platyrhynchos_platyrhynchos_2_148530715_148530822_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148530715 - 148530822

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTATATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATATTTTTAATC

Flanking Amino Acid:

IYICVMTGQTGRNLSDFWEI

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

78.2

29.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.9

0.83

0.8

81.6

34.9

Minor 5ss

32.3

-2

3.3

42.9

44.7

Minor BPS

71.4

0.65

1.1

72.84

31.8

Associated Gene:

Gene:

HHLA1

Ensembl Gene ID:

ENSAPLG00000004380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004491

148519896 - 148536299

16404