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Intron Name: Anas_platyrhynchos_platyrhynchos_2_148553483_148554434_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148553483 - 148554434

Intron Length:

952

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TGGTATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

ATATGATAAAAT

Flanking Amino Acid:

MGKFVKVERQVNDMGKKLDF

Intron Amino Acid Position:

518

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

88.7

25.1

Major BPS

75.8

0.64

65.8

Major PPT

80.2

0.68

0.9

77.1

41.6

Minor 5ss

43.5

-0.7

2.6

59.2

45.4

Minor BPS

44.1

-0.3

2.3

65.9

Associated Gene:

Gene:

KCNQ3

Ensembl Gene ID:

ENSAPLG00000004166

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004295

148552323 - 148614068

61746

ENSAPLT00000026766

148552323 - 148614068

61746

ENSAPLT00000020796

148552323 - 148582605

30283

ENSAPLT00000018869

148552323 - 148614068

61746