Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_148556432_148557113_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148556432 - 148557113

Intron Length:

682

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTTAT

U12 Branch Point Sequence:

GTGGACTTATGC

Flanking Amino Acid:

MLSRIKYLQARVDMIFTPGP

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

25.3

Major BPS

65.9

0.39

1.2

57.6

41.3

Major PPT

96.1

1.04

0.5

95.6

14.9

Minor 5ss

-1.3

3.1

51.9

44.9

Minor BPS

43.4

-0.5

2.1

51.63

45.3

Associated Gene:

Gene:

KCNQ3

Ensembl Gene ID:

ENSAPLG00000004166

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026766

148552323 - 148614068

61746

ENSAPLT00000018869

148552323 - 148614068

61746

ENSAPLT00000004295

148552323 - 148614068

61746