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Intron Name: Anas_platyrhynchos_platyrhynchos_2_148848898_148852383_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148848898 - 148852383

Intron Length:

3486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTTTGGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACTTATTAAACT

Flanking Amino Acid:

RLVTEIEPKEDWIALVKAAA

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.8

86.7

22.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

69.2

0.43

1.7

79.8

32.1

Minor 5ss

42.4

-0.8

58.5

40.4

Minor BPS

56.7

0.29

1.8

74.83

42.2

Associated Gene:

Gene:

PHF20L1

Ensembl Gene ID:

ENSAPLG00000003781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044646

148835619 - 148888108

52490

ENSAPLT00000035781

148835619 - 148888108

52490

ENSAPLT00000017915

148835619 - 148888108

52490