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Intron Name: Anas_platyrhynchos_platyrhynchos_2_148852592_148853251_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148852592 - 148853251

Intron Length:

660

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAAAAGA

5'SS Class:

major

3'SS Sequence:

TTATGTTTAAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTATGTTTAAAA

Flanking Amino Acid:

EEEPTSSDTFVGFPVVDVPK

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

66.8

38.5

Major BPS

84.4

0.85

34.5

Major PPT

0.36

1.2

68.1

41.3

Minor 5ss

32.3

-2

37.4

41.9

Minor BPS

0.34

1.8

73.34

38.4

Associated Gene:

Gene:

PHF20L1

Ensembl Gene ID:

ENSAPLG00000003781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035781

148835619 - 148888108

52490

ENSAPLT00000017915

148835619 - 148888108

52490

ENSAPLT00000003890

148835619 - 148888108

52490

ENSAPLT00000044646

148835619 - 148888108

52490