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Intron Name: Anas_platyrhynchos_platyrhynchos_2_148858250_148861798_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148858250 - 148861798

Intron Length:

3549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAAAT

5'SS Class:

strong_major

3'SS Sequence:

ATTATTTATTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTATTT

Flanking Amino Acid:

NKETAPVLEQEISPKPQSQK

Intron Amino Acid Position:

284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

82.4

29.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.3

0.68

0.9

78.3

39.6

Minor 5ss

41.2

-1

2.9

57.1

47.2

Minor BPS

62.5

0.47

1.8

84.55

36.3

Associated Gene:

Gene:

PHF20L1

Ensembl Gene ID:

ENSAPLG00000003781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003890

148835619 - 148888108

52490

ENSAPLT00000044646

148835619 - 148888108

52490

ENSAPLT00000035781

148835619 - 148888108

52490

ENSAPLT00000017915

148835619 - 148888108

52490