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Intron Name: Anas_platyrhynchos_platyrhynchos_2_148871921_148872115_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148871921 - 148872115

Intron Length:

195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAACTAC

5'SS Class:

major

3'SS Sequence:

CTTAAACTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TCTTCTTAAACT

Flanking Amino Acid:

VIEKDKHSEVGAMRIERKGK

Intron Amino Acid Position:

572

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

64.4

36.5

Major BPS

82.2

0.8

71.9

35.8

Major PPT

74.3

0.55

0.9

65.8

39.7

Minor 5ss

43.6

-0.7

55.1

44.8

Minor BPS

73.1

0.8

1.6

87.23

Associated Gene:

Gene:

PHF20L1

Ensembl Gene ID:

ENSAPLG00000003781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017915

148835619 - 148888108

52490

ENSAPLT00000003890

148835619 - 148888108

52490

ENSAPLT00000044646

148835619 - 148888108

52490