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Intron Name: Anas_platyrhynchos_platyrhynchos_2_148872173_148873458_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148872173 - 148873458

Intron Length:

1286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTACA

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTACTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

AGATGTTCAATT

Flanking Amino Acid:

KLEEKSSTTYGKKKEKEKEK

Intron Amino Acid Position:

591

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

75.1

34.3

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

74.7

0.56

0.9

71.9

38.6

Minor 5ss

42.2

-0.9

2.4

48.9

42.2

Minor BPS

-0

1.9

64.14

40.5

Associated Gene:

Gene:

PHF20L1

Ensembl Gene ID:

ENSAPLG00000003781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044646

148835619 - 148888108

52490

ENSAPLT00000035781

148835619 - 148888108

52490

ENSAPLT00000017915

148835619 - 148888108

52490

ENSAPLT00000003890

148835619 - 148888108

52490