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Intron Name: Anas_platyrhynchos_platyrhynchos_2_148877581_148878004_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148877581 - 148878004

Intron Length:

424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGTTGA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTACTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTTTTTTTTACT

Flanking Amino Acid:

AILSVDLSGENLSDVEFLDD

Intron Amino Acid Position:

681

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

68.7

39.1

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

85.9

0.81

0.8

82.3

34.1

Minor 5ss

39.9

-1.1

3.1

48.4

45.8

Minor BPS

0.84

1.5

91.27

31.8

Associated Gene:

Gene:

PHF20L1

Ensembl Gene ID:

ENSAPLG00000003781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044646

148835619 - 148888108

52490

ENSAPLT00000035781

148835619 - 148888108

52490

ENSAPLT00000017915

148835619 - 148888108

52490

ENSAPLT00000003890

148835619 - 148888108

52490