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Intron Name: Anas_platyrhynchos_platyrhynchos_2_148880214_148882378_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148880214 - 148882378

Intron Length:

2165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGTA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTACACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TGGTCCTCAATT

Flanking Amino Acid:

YICYICRDPPGQRWSAKYLY

Intron Amino Acid Position:

775

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.9

31.7

Major BPS

79.2

0.73

75.3

39.4

Major PPT

67.6

0.4

41.2

Minor 5ss

40.1

-1.1

3.4

55.5

48.7

Minor BPS

69.8

0.7

1.5

81.18

40.6

Associated Gene:

Gene:

PHF20L1

Ensembl Gene ID:

ENSAPLG00000003781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017915

148835619 - 148888108

52490

ENSAPLT00000003890

148835619 - 148888108

52490