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Intron Name: Anas_platyrhynchos_platyrhynchos_2_148883339_148886648_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

148883339 - 148886648

Intron Length:

3310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TGCACCTATGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TTCTGTTGCACC

Flanking Amino Acid:

SFKDDGMNEQKSSAEGNTVF

Intron Amino Acid Position:

964

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

87.1

Major BPS

77.8

0.69

78.2

31.8

Major PPT

57.2

0.16

1.1

56.7

Minor 5ss

35.1

-1.7

2.7

42.8

Minor BPS

45.6

-0.3

2.3

62.35

43.6

Associated Gene:

Gene:

PHF20L1

Ensembl Gene ID:

ENSAPLG00000003781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044646

148835619 - 148888108

52490

ENSAPLT00000035781

148835619 - 148888108

52490

ENSAPLT00000017915

148835619 - 148888108

52490

ENSAPLT00000003890

148835619 - 148888108

52490