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Intron Name: Anas_platyrhynchos_platyrhynchos_2_148945099_148946627_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148945099 - 148946627

Intron Length:

1529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAA

U12 Branch Point Sequence:

TAAGGTTTATTT

Flanking Amino Acid:

LPGPAFQCISDCEKEEACSF

Intron Amino Acid Position:

1608

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

29.3

Major BPS

65.6

0.39

0.9

55.7

32.1

Major PPT

0.83

0.7

84.4

30.5

Minor 5ss

26.1

-2.7

2.9

29.9

43.2

Minor BPS

45.4

-0.2

61.18

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002817

148898432 - 148951478

53047