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Intron Name: Anas_platyrhynchos_platyrhynchos_2_149119430_149122227_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

149119430 - 149122227

Intron Length:

2798

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TAATTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

RPRYEIGVCAQIVGVGCVLN

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

1.2

81.4

32.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.3

0.7

0.9

78.2

35.7

Minor 5ss

35.7

-1.6

3.3

48.3

41.3

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

CCN4

Ensembl Gene ID:

ENSAPLG00000002582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002626

149089682 - 149125384

35703