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Intron Name: Anas_platyrhynchos_platyrhynchos_2_149146960_149148865_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

149146960 - 149148865

Intron Length:

1906

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

CATGTATTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TGTGTAGTAACT

Flanking Amino Acid:

QQDGAPSFQTGYVYPSMDQL

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

80.1

30.7

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

72.6

0.51

0.9

66.3

39.4

Minor 5ss

-1.6

2.9

40.8

45.4

Minor BPS

47.8

-0

2.3

73.22

43.6

Associated Gene:

Gene:

NDRG1

Ensembl Gene ID:

ENSAPLG00000015644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020314

149136285 - 149161042

24758

ENSAPLT00000016349

149136937 - 149209284

72348