Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_14959426_14959968_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14959426 - 14959968

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTAATAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGAAT

U12 Branch Point Sequence:

CTCTTTCTAATA

Flanking Amino Acid:

TSSGKTHTMEGKLHDPDGMG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

81.5

Major BPS

66.8

0.42

1.4

75.9

36.3

Major PPT

66.5

0.37

1.1

73.3

35.2

Minor 5ss

35.6

-1.6

3.3

48.9

41.5

Minor BPS

52.8

0.08

1.7

62.52

38.9

Associated Gene:

Gene:

KIF5B

Ensembl Gene ID:

ENSAPLG00000008099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033827

14949734 - 14982042

32309

ENSAPLT00000024704

14949734 - 14982042

32309

ENSAPLT00000008521

14949734 - 14982042

32309