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Intron Name: Anas_platyrhynchos_platyrhynchos_2_14960497_14960802_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
14960497 - 14960802

Intron Length:
306

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTAAGCCTT

5'SS Class:
strong_major

3'SS Sequence:
TTTTCTCTTCCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AAATCAT

U12 Branch Point Sequence:
GATGCCTTAGCT

Flanking Amino Acid:
YLDKIRDLLDVSKTNLSVHE

Intron Amino Acid Position:
148

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.6
0.77
1
74.5
41.9

Major BPS
71.6
0.54
1
72
33.1

Major PPT
92.3
0.95
0.6
85.1
29.7

Minor 5ss
43.9
-0.7
3.2
62.5
43.1

Minor BPS
64.5
0.53
1.7
78.27
43.5

Associated Gene:

Gene:
KIF5B

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14949734 - 14982042
32309

14949734 - 14982042
32309