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Intron Name: Anas_platyrhynchos_platyrhynchos_2_14960859_14960970_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
14960859 - 14960970

Intron Length:
112

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTAGTGTT

5'SS Class:
strong_major

3'SS Sequence:
TTTTTTTTTAAAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ACTTTAC

U12 Branch Point Sequence:
TTTTTTTTAAAG

Flanking Amino Acid:
EDKNRVPYVKGCTERFVCSP

Intron Amino Acid Position:
167

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.1
0.85
1
86.4
29.2

Major BPS
65.2
0.38
1
57.3
39.1

Major PPT
87.3
0.84
0.9
89.9
23.6

Minor 5ss
35
-1.7
3.3
50
46.3

Minor BPS
72.6
0.57
1.4
75.95
35.7

Associated Gene:

Gene:
KIF5B

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14949734 - 14982042
32309

14949734 - 14982042
32309