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Intron Name: Anas_platyrhynchos_platyrhynchos_2_14973164_14973499_F


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
14973164 - 14973499

Intron Length:
336

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAGGCATA

5'SS Class:
strong_major

3'SS Sequence:
CTGTTCCTATTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AAAACAT

U12 Branch Point Sequence:
CTGGCTAAAACA

Flanking Amino Acid:
NEELVQLRAQEKVHEMEKEH

Intron Amino Acid Position:
678

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.3
0.76
1
78
38.6

Major BPS
54.4
0.11
1
61.4
34.3

Major PPT
71.5
0.49
0.9
71.2
34.5

Minor 5ss
41.6
-0.9
3.2
56.7
47.6

Minor BPS
44.9
-0.3
2
55.15
44.3

Associated Gene:

Gene:
KIF5B

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14949734 - 14982042
32309

14949734 - 14982042
32309

14949734 - 14982042
32309