About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_14973762_14974132_F


Intron Information:

Intron Rank:
19

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
14973762 - 14974132

Intron Length:
371

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGA|GTAAGCAAT

5'SS Class:
major

3'SS Sequence:
CTTTTGTCTTCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAA

U12 Branch Point Sequence:
TTACACCTAACA

Flanking Amino Acid:
AKEKLITELQDQNQKMMLEQ

Intron Amino Acid Position:
735

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.2
0.52
1.1
71.6
40.1

Major BPS
90.4
1
0.7
90.2
19.3

Major PPT
86.9
0.83
0.7
84.7
30.2

Minor 5ss
42.3
-0.8
2.9
54.2
43.9

Minor BPS
56.4
0.2
1.9
72.32
38.5

Associated Gene:

Gene:
KIF5B

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14949734 - 14982042
32309

14949734 - 14982042
32309

14949734 - 14982042
32309