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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_150008210_150009175_F

Intron Information:

Intron Rank:
137412
Intron Class:
major-like
Intron Phase:
Intron Coordinates:
150008210 - 150009175
Intron Length:
966

Sequence Information:

Terminal Dinucleotides:
GT-GG
5'SS Sequence:
ATG|GTACGGACA
5'SS Class:
major
3'SS Sequence:
TTTTTCTTTTTGG|T
3'SS Class:
degenerate_major
U2 Branch Point Sequence:
TATTTAT
U12 Branch Point Sequence:
TTTTATTTATTT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
73.3
0.55
1.1
65.2
40.3
Major BPS
88.7
0.96
0.8
78
36.5
Major PPT
49
-0
3.2
85.4
29.4
Minor 5ss
31.6
-2.1
3.2
37.5
42
Minor BPS
64.4
0.53
1.7
84.57
36.4

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000023982
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000025752
150007952 - 150009280
1329