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Intron Name: Anas_platyrhynchos_platyrhynchos_2_150040954_150043382_F

Intron Information:

Intron Rank:

148006

Intron Class:

major

Intron Phase:

Intron Coordinates:

150040954 - 150043382

Intron Length:

2429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTCCAC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTGGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TGCTTTAGGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

57.8

41.3

Major BPS

73.8

0.59

0.9

26.8

Major PPT

89.2

0.88

0.8

88.3

28.9

Minor 5ss

44.3

-0.6

2.8

59.2

45.5

Minor BPS

46.5

-0.2

1.7

64.75

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044179

150034653 - 150044068

9416