Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_150144806_150165810_R

Intron Information:

Intron Rank:

155490

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

150144806 - 150165810

Intron Length:

21005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGAACA

5'SS Class:

major

3'SS Sequence:

ATCACCTGAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

ATCACCTGAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.2

68.2

36.3

Major BPS

84.8

0.86

85.7

34.9

Major PPT

49.4

-0

1.1

49.2

37.7

Minor 5ss

36.2

-1.6

2.6

42.2

44.1

Minor BPS

56.1

0.19

1.6

65.24

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038907

150142718 - 150166042

23325