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Intron Name: Anas_platyrhynchos_platyrhynchos_2_150258266_150268318_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
150258266 - 150268318

Intron Length:
10053

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAATATC

5'SS Class:
strong_major

3'SS Sequence:
TATATTACTTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTATAT

U12 Branch Point Sequence:
ATTTCTTTATAT

Flanking Amino Acid:
ARGVPVPALSSRLCLGTSLL

Intron Amino Acid Position:
204

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.1
0.92
0.8
87.7
26.2

Major BPS
79.2
0.73
1
75.3
39.4

Major PPT
78.4
0.64
0.9
75.1
39.2

Minor 5ss
39.6
-1.2
2.9
54
43.3

Minor BPS
66.4
0.59
1.7
83.63
37.1

Associated Gene:

Gene:
KHDRBS3

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

150212356 - 150300112
87757

150212356 - 150303283
90928

150212356 - 150299689
87334