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Intron Name: Anas_platyrhynchos_platyrhynchos_2_150258266_150269830_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
150258266 - 150269830

Intron Length:
11565

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAATATC

5'SS Class:
strong_major

3'SS Sequence:
CATGTATTCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTAAT

U12 Branch Point Sequence:
TGTTATTTAATA

Flanking Amino Acid:
ARGVPVPALSRGRGGVPPPP

Intron Amino Acid Position:
204

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.1
0.92
0.8
87.7
26.2

Major BPS
90.7
1.01
0.7
90
19.9

Major PPT
72.1
0.5
0.9
64.9
40.1

Minor 5ss
39.6
-1.2
2.9
54
43.3

Minor BPS
70.2
0.63
1.4
77.01
33.7

Associated Gene:

Gene:
KHDRBS3

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

150212356 - 150303283
90928