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Intron Name: Anas_platyrhynchos_platyrhynchos_2_15083378_15084454_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15083378 - 15084454

Intron Length:

1077

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

AAATTATTAACA

Flanking Amino Acid:

IQKLRFAVNHDEKLDLNDSK

Intron Amino Acid Position:

742

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

82.6

31.3

Major BPS

81.9

0.79

0.8

81.9

Major PPT

86.5

0.82

0.7

84.9

Minor 5ss

45.2

-0.5

2.8

62.5

42.2

Minor BPS

0.4

1.5

69.22

36.1

Associated Gene:

Gene:

ARHGAP12

Ensembl Gene ID:

ENSAPLG00000007667

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019650

15015827 - 15085570

69744

ENSAPLT00000036342

15010829 - 15085570

74742

ENSAPLT00000018259

15015827 - 15086570

70744

ENSAPLT00000035657

15015827 - 15086570

70744

ENSAPLT00000042048

15015827 - 15086570

70744

ENSAPLT00000007993

15010829 - 15085570

74742

ENSAPLT00000033992

15015827 - 15086570

70744

ENSAPLT00000023174

15015827 - 15085570

69744

ENSAPLT00000038659

15015827 - 15085570

69744