Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_151324449_151328631_R

Intron Information:

Intron Rank:

142702

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

151324449 - 151328631

Intron Length:

4183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTAA

5'SS Class:

strong_major

3'SS Sequence:

TTAATGTCATAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

28.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

57.6

0.17

1.2

43.3

Minor 5ss

-1.6

3.3

46.2

49.1

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024049

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038277

151324416 - 151340686

16271

ENSAPLT00000026848

151324416 - 151345194

20779