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Intron Name: Anas_platyrhynchos_platyrhynchos_2_151553109_151580104_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
151553109 - 151580104

Intron Length:
26996

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGCGTGAC

5'SS Class:
strong_major

3'SS Sequence:
TCTGTCTCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
ACGTTTTTAATT

Flanking Amino Acid:
MLATGMVVRRYYQIRAGLK

Intron Amino Acid Position:
10

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.8
0.75
0.9
72.1
33.4

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
77.6
0.62
0.8
69.4
36.9

Minor 5ss
26.5
-2.7
3.2
33.9
42.2

Minor BPS
67.4
0.62
1.2
72.92
39.2

Associated Gene:

Gene:
FAM135B

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

151474337 - 151580133
105797