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Intron Name: Anas_platyrhynchos_platyrhynchos_2_152573060_152619200_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152573060 - 152619200

Intron Length:

46141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTGTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TCCTTTTTACCC

Flanking Amino Acid:

DLILHAGECQRMAIQVDKFN

Intron Amino Acid Position:

935

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

75.7

40.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

84.5

0.78

0.8

78.9

33.1

Minor 5ss

37.3

-1.4

52.6

43.7

Minor BPS

57.9

0.23

1.6

64.58

42.1

Associated Gene:

Gene:

TRAPPC9

Ensembl Gene ID:

ENSAPLG00000010275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010730

152572879 - 152785033

212155

ENSAPLT00000010722

152572879 - 152785033

212155

ENSAPLT00000047582

152572879 - 152785033

212155