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Intron Name: Anas_platyrhynchos_platyrhynchos_2_152724088_152727618_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152724088 - 152727618

Intron Length:

3531

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

GTCACTTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTATTCTAATAT

Flanking Amino Acid:

PRLQISTSLPRSAHTLQPSS

Intron Amino Acid Position:

703

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

83.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

74.7

0.56

0.9

69.1

36.8

Minor 5ss

28.5

-2.5

3.1

38.7

46.6

Minor BPS

49.7

0.06

73.55

43.2

Associated Gene:

Gene:

TRAPPC9

Ensembl Gene ID:

ENSAPLG00000010275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047582

152572879 - 152785033

212155

ENSAPLT00000010730

152572879 - 152785033

212155

ENSAPLT00000010722

152572879 - 152785033

212155