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Intron Name: Anas_platyrhynchos_platyrhynchos_2_152727752_152729420_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

152727752 - 152729420

Intron Length:

1669

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

TTCCAAAAATCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCCAAA

U12 Branch Point Sequence:

TCTTCCAAAAAT

Flanking Amino Acid:

PQTTGQITVNGYHTSVFGVF

Intron Amino Acid Position:

659

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

74.8

35.1

Major BPS

62.7

0.32

1.2

33.2

Major PPT

59.6

0.22

1.1

57.3

41.1

Minor 5ss

-2.2

3.6

43.1

45.5

Minor BPS

54.2

0.21

2.1

78.17

43.8

Associated Gene:

Gene:

TRAPPC9

Ensembl Gene ID:

ENSAPLG00000010275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047582

152572879 - 152785033

212155

ENSAPLT00000010730

152572879 - 152785033

212155

ENSAPLT00000010722

152572879 - 152785033

212155