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Intron Name: Anas_platyrhynchos_platyrhynchos_2_152760280_152762796_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152760280 - 152762796

Intron Length:

2517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTATTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTTGATGACT

Flanking Amino Acid:

LSLDPKDFSKGTHRGWAAVQ

Intron Amino Acid Position:

449

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

90.4

20.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

82.3

0.73

0.8

77.5

36.5

Minor 5ss

33.2

-1.9

3.4

48.7

47.5

Minor BPS

53.1

0.18

2.3

83.64

37.4

Associated Gene:

Gene:

TRAPPC9

Ensembl Gene ID:

ENSAPLG00000010275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047582

152572879 - 152785033

212155

ENSAPLT00000010730

152572879 - 152785033

212155

ENSAPLT00000010722

152572879 - 152785033

212155