Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_152815968_152817756_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152815968 - 152817756

Intron Length:

1789

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGTTGA

5'SS Class:

major

3'SS Sequence:

TTTCCTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TGTGCATTAATG

Flanking Amino Acid:

QPPSILYGGRNKAIATPVQG

Intron Amino Acid Position:

429

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

66.1

42.4

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

88.8

0.87

0.7

Minor 5ss

38.1

-1.3

40.9

45.3

Minor BPS

59.3

0.15

1.8

65.31

42.6

Associated Gene:

Gene:

AGO2

Ensembl Gene ID:

ENSAPLG00000010465

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010970

152804088 - 152847151

43064