Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_152923851_152924845_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152923851 - 152924845

Intron Length:

995

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

TGCCTTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTAATTTGAATT

Flanking Amino Acid:

ISYLTDKGANPTHLADFNQV

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

80.1

34.8

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

80.6

0.69

0.8

76.4

32.2

Minor 5ss

40.2

-1.1

3.1

54.8

42.5

Minor BPS

58.5

0.35

1.4

73.95

Associated Gene:

Gene:

PTK2

Ensembl Gene ID:

ENSAPLG00000011901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024030

152858263 - 153035137

176875

ENSAPLT00000047904

152858263 - 153035137

176875

ENSAPLT00000021673

152858263 - 152992228

133966

ENSAPLT00000044829

152858263 - 153035137

176875

ENSAPLT00000012552

152858812 - 152994152

135341

ENSAPLT00000035443

152858263 - 153035137

176875

ENSAPLT00000033488

152858812 - 153009310

150499