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Intron Name: Anas_platyrhynchos_platyrhynchos_2_153486978_153511584_F

Intron Information:

Intron Rank:

146976

Intron Class:

major

Intron Phase:

Intron Coordinates:

153486978 - 153511584

Intron Length:

24607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTAAG

5'SS Class:

major

3'SS Sequence:

CTTTTTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAC

U12 Branch Point Sequence:

AAACAGCTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

39.5

Major BPS

60.6

0.26

1.1

61.4

34.2

Major PPT

85.3

0.79

0.8

84.6

30.3

Minor 5ss

37.3

-1.4

2.8

48.1

41.6

Minor BPS

41.8

-0.5

2.3

60.49

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029157

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029519

153486932 - 153519204

32273