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Intron Name: Anas_platyrhynchos_platyrhynchos_2_15371954_15398553_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

15371954 - 15398553

Intron Length:

26600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

TGTATCAGAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

80.5

33.9

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

91.3

0.93

0.6

84.4

30.6

Minor 5ss

31.5

-2.1

42.7

44.3

Minor BPS

0.17

1.8

75.64

40.2

Associated Gene:

Gene:

ZNF438

Ensembl Gene ID:

ENSAPLG00000007479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020047

15371312 - 15416440

45129