Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_153833342_153833456_F

Intron Information:

Intron Rank:

145176

Intron Class:

major

Intron Phase:

Intron Coordinates:

153833342 - 153833456

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTCAGATGA

5'SS Class:

major

3'SS Sequence:

GTTGGTTTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TGTTGTTTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.37

1.3

62.4

39.1

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

75.3

0.57

0.9

68.8

42.1

Minor 5ss

34.4

-1.8

39.5

Minor BPS

51.5

0.13

2.2

75.88

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043724

153829955 - 153837419

7465