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Intron Name: Anas_platyrhynchos_platyrhynchos_2_154092061_154176044_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

154092061 - 154176044

Intron Length:

83984

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTCTACGTTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAC

U12 Branch Point Sequence:

TGTTTTCTACGT

Flanking Amino Acid:

EQLAKASQHQFFLHQEDLNF

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

69.9

41.1

Major BPS

63.9

0.35

1.3

64.5

42.5

Major PPT

0.56

0.9

69.6

36.4

Minor 5ss

33.8

-1.8

3.2

40.5

39.9

Minor BPS

45.6

-0.2

2.1

68.31

Associated Gene:

Gene:

TSNARE1

Ensembl Gene ID:

ENSAPLG00000005699

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037372

154091481 - 154443779

352299